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Package: annaffy
Version: 1.4.0
Command: D:\biocbld\R-2.3.0\bin\R.exe CMD build annaffy
RetCode: 0
Time: 110.5 seconds
Status: OK
PackageFile: annaffy_1.4.0.tar.gz

Command output

* checking for file 'annaffy/DESCRIPTION' ... OK
* preparing 'annaffy':
* checking DESCRIPTION meta-information ... OK
* installing the package to re-build vignettes
installing R.css in D:/biocbld/work-area/1.8d/tmpdir/Rinst511284786


---------- Making package annaffy ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  installing R files
  save image
Loading required package: Biobase
Loading required package: tools

Welcome to Bioconductor

    Vignettes contain introductory material. To view, type
    'openVignette()' or start with 'help(Biobase)'. For details
    on reading vignettes, see the openVignette help page.

Loading required package: GO
Loading required package: KEGG
  installing inst files
  installing data files
  installing man source files
  installing indices
  not zipping data
  installing help
 >>> Building/Updating help pages for package 'annaffy'
     Formats: text html latex example chm 
  aaf.character                     text    html    latex           chm
  aaf.goterm                        text    html    latex           chm
  aaf.handler                       text    html    latex           chm
  aaf.integer                       text    html    latex           chm
  aaf.raw                           text    html    latex           chm
  aafChromLoc-class                 text    html    latex           chm
  aafChromLoc                       text    html    latex   example chm
  aafChromosome-class               text    html    latex           chm
  aafChromosome                     text    html    latex   example chm
  aafCytoband-class                 text    html    latex           chm
  aafCytoband                       text    html    latex   example chm
  aafDescription-class              text    html    latex           chm
  aafDescription                    text    html    latex   example chm
  aafExpr                           text    html    latex           chm
  aafFunction-class                 text    html    latex           chm
  aafFunction                       text    html    latex   example chm
  aafGO-class                       text    html    latex           chm
  aafGO                             text    html    latex   example chm
  aafGOItem-class                   text    html    latex           chm
  aafGenBank-class                  text    html    latex           chm
  aafGenBank                        text    html    latex   example chm
  aafIntensity-class                text    html    latex           chm
  aafList-class                     text    html    latex           chm
  aafLocusLink-class                text    html    latex           chm
  aafLocusLink                      text    html    latex   example chm
  aafPathway-class                  text    html    latex           chm
  aafPathway                        text    html    latex   example chm
  aafPathwayItem-class              text    html    latex           chm
  aafProbe-class                    text    html    latex           chm
  aafProbe                          text    html    latex   example chm
  aafPubMed-class                   text    html    latex           chm
  aafPubMed                         text    html    latex   example chm
  aafSearchGO                       text    html    latex           chm
  aafSearchText                     text    html    latex   example chm
  aafSigned-class                   text    html    latex           chm
  aafSymbol-class                   text    html    latex           chm
  aafSymbol                         text    html    latex   example chm
  aafTable-class                    text    html    latex           chm
  aafTable                          text    html    latex           chm
  aafTableAnn                       text    html    latex           chm
  aafTableFrame                     text    html    latex           chm
  aafTableInt                       text    html    latex           chm
  aafUniGene-class                  text    html    latex           chm
  aafUniGene                        text    html    latex   example chm
  chkPkgs                           text    html    latex           chm
  getCSS-methods                    text    html    latex           chm
  getHTML-methods                   text    html    latex           chm
  getTD-methods                     text    html    latex           chm
  getText-methods                   text    html    latex           chm
  getURL-methods                    text    html    latex           chm
  is.annpkg                         text    html    latex   example chm
  selectorWidget                    text    html    latex           chm
Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\work-area\1.8d\madman\Rpacks\annaffy\chm\annaffy.chm





Compile time: 0 minutes, 0 seconds

53	Topics

306	Local links

5	Internet links

1	Graphic





Created d:\biocbld\work-area\1.8d\madman\Rpacks\annaffy\chm\annaffy.chm, 47,361 bytes

Compression decreased file by 101,331 bytes.

  adding MD5 sums

* DONE (annaffy)
* creating vignettes ... OK
* removing junk files
* checking for LF line-endings in source files
* checking for empty or unneeded directories
* building 'annaffy_1.4.0.tar.gz'