Back to Multiple platform build/check report

Package: affxparser
Version: 1.4.0
Command: D:\biocbld\R-2.3.0\bin\R.exe CMD INSTALL --build affxparser_1.4.0.tar.gz
RetCode: 0
Time: 148.0 seconds
Status: OK
PackageFile: affxparser_1.4.0.zip

Command output


Using auto-selected zip options ' affxparser-HELP=ziponly'

---------- Making package affxparser ------------
  adding build stamp to DESCRIPTION
  installing NAMESPACE file and metadata
  making DLL ...
making R_affx_cdf_extras.d from R_affx_cdf_extras.cpp
making R_affx_cdf_parser.d from R_affx_cdf_parser.cpp
making R_affx_cel_parser.d from R_affx_cel_parser.cpp
making R_affx_test_cmd_line.d from R_affx_test_cmd_line.cpp
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/file/BARFileData.cpp -o fusion_sdk/file/BARFileData.o
In file included from fusion_sdk/file/BARFileData.cpp:21:
fusion_sdk/file/BARFileData.h:30: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/file/BPMAPFileData.cpp -o fusion_sdk/file/BPMAPFileData.o
In file included from fusion_sdk/file/BPMAPFileData.cpp:21:
fusion_sdk/file/BPMAPFileData.h:30: warning: ignoring #pragma warning 
fusion_sdk/file/BPMAPFileData.cpp: In member function `bool affxbpmap::CBPMAPFileData::ReadDataSection()':
fusion_sdk/file/BPMAPFileData.cpp:370: warning: unused variable 'probeIn'
fusion_sdk/file/BPMAPFileData.cpp:371: warning: unused variable 'probeOut'
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/file/CDFFileData.cpp -o fusion_sdk/file/CDFFileData.o
In file included from fusion_sdk/file/CDFFileData.cpp:28:
fusion_sdk/file/CDFFileData.h:31: warning: ignoring #pragma warning 
fusion_sdk/file/CDFFileData.cpp:36: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/file/CELFileData.cpp -o fusion_sdk/file/CELFileData.o
fusion_sdk/file/CELFileData.cpp:33: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/file/CHPFileData.cpp -o fusion_sdk/file/CHPFileData.o
In file included from fusion_sdk/file/CHPFileData.cpp:21:
fusion_sdk/file/CHPFileData.h:30: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/file/EXPFileData.cpp -o fusion_sdk/file/EXPFileData.o
fusion_sdk/file/EXPFileData.cpp:28: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/file/FileIO.cpp -o fusion_sdk/file/FileIO.o
fusion_sdk/file/FileIO.cpp:32: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/file/GRCFileData.cpp -o fusion_sdk/file/GRCFileData.o
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/file/MSKFileData.cpp -o fusion_sdk/file/MSKFileData.o
fusion_sdk/file/MSKFileData.cpp:29: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/file/PSIFileData.cpp -o fusion_sdk/file/PSIFileData.o
fusion_sdk/file/PSIFileData.cpp:28: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/gcast/src/GridControlData.cpp -o fusion_sdk/gcast/src/GridControlData.o
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/array/src/ArrayAttributes.cpp -o fusion_sdk/calvin_files/array/src/ArrayAttributes.o
In file included from fusion_sdk/calvin_files/array/src/ArrayAttributes.h:28,
                 from fusion_sdk/calvin_files/array/src/ArrayAttributes.cpp:21:
fusion_sdk/calvin_files/parameter/src/Parameter.h:34: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/array/src/ArrayAudit.cpp -o fusion_sdk/calvin_files/array/src/ArrayAudit.o
In file included from fusion_sdk/calvin_files/array/src/ArrayAudit.h:29,
                 from fusion_sdk/calvin_files/array/src/ArrayAudit.cpp:21:
fusion_sdk/calvin_files/parameter/src/Parameter.h:34: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/array/src/ArrayData.cpp -o fusion_sdk/calvin_files/array/src/ArrayData.o
In file included from fusion_sdk/calvin_files/array/src/ArrayData.h:30,
                 from fusion_sdk/calvin_files/array/src/ArrayData.cpp:21:
fusion_sdk/calvin_files/parameter/src/Parameter.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/array/src/ArrayData.h:31,
                 from fusion_sdk/calvin_files/array/src/ArrayData.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/CDFData.cpp -o fusion_sdk/calvin_files/data/src/CDFData.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFData.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFData.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFData.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFData.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFData.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFData.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CDFData.cpp:21:
fusion_sdk/calvin_files/data/src/CDFData.h:36: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/CDFProbeGroupInformation.cpp -o fusion_sdk/calvin_files/data/src/CDFProbeGroupInformation.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeGroupInformation.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeGroupInformation.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeGroupInformation.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeGroupInformation.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeGroupInformation.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeGroupInformation.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeGroupInformation.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeGroupInformation.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CDFProbeGroupInformation.cpp:21:
fusion_sdk/calvin_files/data/src/CDFData.h:36: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/CDFProbeInformation.cpp -o fusion_sdk/calvin_files/data/src/CDFProbeInformation.o
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:29,
                 from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/CDFProbeInformation.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeInformation.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:30,
                 from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/CDFProbeInformation.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeInformation.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/CDFProbeInformation.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeInformation.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/CDFProbeInformation.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeInformation.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/CDFProbeInformation.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeInformation.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/CDFProbeInformation.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeInformation.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/CDFProbeSetInformation.cpp -o fusion_sdk/calvin_files/data/src/CDFProbeSetInformation.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CDFProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/CDFData.h:36: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.cpp -o fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.o
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:29,
                 from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:30,
                 from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/CDFQCProbeSetInformation.cpp -o fusion_sdk/calvin_files/data/src/CDFQCProbeSetInformation.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/data/src/CDFQCProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CDFQCProbeSetInformation.cpp:21:
fusion_sdk/calvin_files/data/src/CDFData.h:36: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/CELData.cpp -o fusion_sdk/calvin_files/data/src/CELData.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/data/src/CELData.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/data/src/CELData.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/data/src/CELData.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/data/src/CELData.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/data/src/CELData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/data/src/CELData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/data/src/CELData.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/data/src/CELData.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CELData.cpp:21:
fusion_sdk/calvin_files/data/src/CELData.h:34: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/CELData.cpp: In member function `bool affymetrix_calvin_io::CelFileData::GetIntensities(int32_t, int32_t, FloatVector&)':
fusion_sdk/calvin_files/data/src/CELData.cpp:427: warning: comparison between signed and unsigned integer expressions
fusion_sdk/calvin_files/data/src/CELData.cpp:431: warning: comparison between signed and unsigned integer expressions
fusion_sdk/calvin_files/data/src/CELData.cpp: In member function `bool affymetrix_calvin_io::CelFileData::GetStdev(int32_t, int32_t, FloatVector&)':
fusion_sdk/calvin_files/data/src/CELData.cpp:445: warning: comparison between signed and unsigned integer expressions
fusion_sdk/calvin_files/data/src/CELData.cpp: In member function `bool affymetrix_calvin_io::CelFileData::GetNumPixels(int32_t, int32_t, Int16Vector&)':
fusion_sdk/calvin_files/data/src/CELData.cpp:459: warning: comparison between signed and unsigned integer expressions
fusion_sdk/calvin_files/data/src/BitFlag.h: At global scope:
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/CHPBackgroundZone.cpp -o fusion_sdk/calvin_files/data/src/CHPBackgroundZone.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.h:24,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.h:24,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.h:24,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.h:24,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.h:24,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.h:24,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.h:24,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.h:24,
                 from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPBackgroundZone.cpp:21:
fusion_sdk/calvin_files/data/src/CHPBackgroundZone.h:30: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/CHPData.cpp -o fusion_sdk/calvin_files/data/src/CHPData.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/data/src/CHPData.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/data/src/CHPData.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/data/src/CHPData.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/data/src/CHPData.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/data/src/CHPData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/data/src/CHPData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/data/src/CHPData.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/data/src/CHPData.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:30,
                 from fusion_sdk/calvin_files/data/src/CHPData.cpp:21:
fusion_sdk/calvin_files/data/src/CHPBackgroundZone.h:30: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:31,
                 from fusion_sdk/calvin_files/data/src/CHPData.cpp:21:
fusion_sdk/calvin_files/data/src/CHPUniversalEntry.h:28: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:33,
                 from fusion_sdk/calvin_files/data/src/CHPData.cpp:21:
fusion_sdk/calvin_files/data/src/CHPGenotypeEntry.h:28: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/CHPExpressionEntry.cpp -o fusion_sdk/calvin_files/data/src/CHPExpressionEntry.o
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/CHPGenotypeEntry.cpp -o fusion_sdk/calvin_files/data/src/CHPGenotypeEntry.o
In file included from fusion_sdk/calvin_files/data/src/CHPGenotypeEntry.cpp:21:
fusion_sdk/calvin_files/data/src/CHPGenotypeEntry.h:28: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/CHPUniversalEntry.cpp -o fusion_sdk/calvin_files/data/src/CHPUniversalEntry.o
In file included from fusion_sdk/calvin_files/data/src/CHPUniversalEntry.cpp:21:
fusion_sdk/calvin_files/data/src/CHPUniversalEntry.h:28: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/DATData.cpp -o fusion_sdk/calvin_files/data/src/DATData.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/data/src/DATData.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/data/src/DATData.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/data/src/DATData.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/data/src/DATData.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/data/src/DATData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/data/src/DATData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/data/src/DATData.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/data/src/DATData.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DATData.cpp:21:
fusion_sdk/calvin_files/data/src/DATData.h:33: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/DATData.cpp: In member function `bool affymetrix_calvin_io::DATData::GetPixels(u_int16_t*, u_int32_t, u_int32_t, u_int32_t, u_int32_t)':
fusion_sdk/calvin_files/data/src/DATData.cpp:378: warning: comparison between signed and unsigned integer expressions
fusion_sdk/calvin_files/data/src/DATData.cpp:381: warning: comparison between signed and unsigned integer expressions
fusion_sdk/calvin_files/data/src/DATData.cpp:384: warning: comparison between signed and unsigned integer expressions
fusion_sdk/calvin_files/data/src/DATData.cpp:494:2: warning: no newline at end of file
fusion_sdk/calvin_files/data/src/BitFlag.h: At global scope:
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/DataGroup.cpp -o fusion_sdk/calvin_files/data/src/DataGroup.o
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:29,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/DataGroup.h:28,
                 from fusion_sdk/calvin_files/data/src/DataGroup.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:30,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/DataGroup.h:28,
                 from fusion_sdk/calvin_files/data/src/DataGroup.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/DataGroup.h:28,
                 from fusion_sdk/calvin_files/data/src/DataGroup.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/DataGroup.h:28,
                 from fusion_sdk/calvin_files/data/src/DataGroup.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/DataGroup.h:28,
                 from fusion_sdk/calvin_files/data/src/DataGroup.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/DataGroup.h:28,
                 from fusion_sdk/calvin_files/data/src/DataGroup.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/DataGroup.h:28,
                 from fusion_sdk/calvin_files/data/src/DataGroup.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/DataGroup.cpp:22:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/DataGroup.h: In constructor `affymetrix_calvin_io::DataGroup::DataGroup(const std::string&, const affymetrix_calvin_io::DataGroupHeader&, void*, bool)':
fusion_sdk/calvin_files/data/src/DataGroup.h:101: warning: `affymetrix_calvin_io::DataGroup::fileStream' will be initialized after
fusion_sdk/calvin_files/data/src/DataGroup.h:97: warning:   `bool affymetrix_calvin_io::DataGroup::useMemoryMapping'
fusion_sdk/calvin_files/data/src/DataGroup.cpp:35: warning:   when initialized here
fusion_sdk/calvin_files/data/src/DataGroup.h: In constructor `affymetrix_calvin_io::DataGroup::DataGroup(const std::string&, const affymetrix_calvin_io::DataGroupHeader&, std::ifstream&, bool)':
fusion_sdk/calvin_files/data/src/DataGroup.h:101: warning: `affymetrix_calvin_io::DataGroup::fileStream' will be initialized after
fusion_sdk/calvin_files/data/src/DataGroup.h:97: warning:   `bool affymetrix_calvin_io::DataGroup::useMemoryMapping'
fusion_sdk/calvin_files/data/src/DataGroup.cpp:43: warning:   when initialized here
fusion_sdk/calvin_files/data/src/BitFlag.h: At global scope:
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/DataGroupHeader.cpp -o fusion_sdk/calvin_files/data/src/DataGroupHeader.o
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:29,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:30,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.cpp:22:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/DataSet.cpp -o fusion_sdk/calvin_files/data/src/DataSet.o
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:29,
                 from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/DataSet.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:30,
                 from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/DataSet.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/DataSet.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/DataSet.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/DataSet.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSet.h:29,
                 from fusion_sdk/calvin_files/data/src/DataSet.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/DataSet.cpp:22:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/DataSet.cpp:22:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/DataSetHeader.cpp -o fusion_sdk/calvin_files/data/src/DataSetHeader.o
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:29,
                 from fusion_sdk/calvin_files/data/src/DataSetHeader.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:30,
                 from fusion_sdk/calvin_files/data/src/DataSetHeader.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataSetHeader.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataSetHeader.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataSetHeader.cpp:22:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.cpp:22:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/FileHeader.cpp -o fusion_sdk/calvin_files/data/src/FileHeader.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/FileHeader.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/FileHeader.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/FileHeader.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/FileHeader.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/FileHeader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/FileHeader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/FileHeader.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/GenericData.cpp -o fusion_sdk/calvin_files/data/src/GenericData.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/GenericData.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/GenericData.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/GenericData.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/GenericData.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/GenericData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/GenericData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/GenericData.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/GenericData.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.cpp:22:
fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.cpp:23:
fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.h:35: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/data/src/GenericDataHeader.cpp -o fusion_sdk/calvin_files/data/src/GenericDataHeader.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/GenericDataHeader.cpp:22:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.cpp:22:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/exception/src/ExceptionBase.cpp -o fusion_sdk/calvin_files/exception/src/ExceptionBase.o
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp -o fusion_sdk/calvin_files/fusion/src/FusionCDFData.o
In file included from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:21:
fusion_sdk/file/CDFFileData.h:31: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:21:
fusion_sdk/calvin_files/data/src/CDFData.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:22:
fusion_sdk/calvin_files/parsers/src/CDFFileReader.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:23:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:23:
fusion_sdk/calvin_files/parsers/src/DataSetReader.h:31: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:23:
fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:23:
fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:36: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp: In member function `char affymetrix_fusion_io::FusionCDFProbeInformation::GetPBase() const':
fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:420: warning: converting to non-pointer type `char' from NULL
fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp: In member function `char affymetrix_fusion_io::FusionCDFProbeInformation::GetTBase() const':
fusion_sdk/calvin_files/fusion/src/FusionCDFData.cpp:433: warning: converting to non-pointer type `char' from NULL
fusion_sdk/calvin_files/data/src/BitFlag.h: At global scope:
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/fusion/src/FusionCDFQCProbeSetNames.cpp -o fusion_sdk/calvin_files/fusion/src/FusionCDFQCProbeSetNames.o
In file included from fusion_sdk/calvin_files/fusion/src/FusionCDFQCProbeSetNames.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFQCProbeSetNames.cpp:21:
fusion_sdk/file/CDFFileData.h:31: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/fusion/src/FusionCELData.cpp -o fusion_sdk/calvin_files/fusion/src/FusionCELData.o
In file included from fusion_sdk/calvin_files/fusion/src/FusionTagValuePairType.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:24,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/fusion/src/FusionCELData.cpp:21:
fusion_sdk/calvin_files/fusion/src/FusionCELData.h:36: warning: `class affymetrix_fusion_io::FusionCELData' has virtual functions but non-virtual destructor
In file included from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.cpp:23:
fusion_sdk/calvin_files/data/src/CELData.h:34: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/fusion/src/FusionCHPData.cpp -o fusion_sdk/calvin_files/fusion/src/FusionCHPData.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.cpp:22:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.cpp:22:
fusion_sdk/calvin_files/parsers/src/DataSetReader.h:31: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPData.cpp:22:
fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/fusion/src/FusionCHPData.cpp:22:
fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:36: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/fusion/src/FusionGrcFileReader.cpp -o fusion_sdk/calvin_files/fusion/src/FusionGrcFileReader.o
In file included from fusion_sdk/calvin_files/fusion/src/FusionGrcFileReader.cpp:23:
fusion_sdk/calvin_files/parsers/src/GridControlFileReader.h:36: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/fusion/src/FusionProbeSetResults.cpp -o fusion_sdk/calvin_files/fusion/src/FusionProbeSetResults.o
In file included from fusion_sdk/calvin_files/fusion/src/FusionProbeSetResults.cpp:21:
fusion_sdk/calvin_files/fusion/src/FusionProbeSetResults.h:28: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/fusion/src/FusionProbeSetResults.cpp:22:
fusion_sdk/file/CHPFileData.h:30: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.cpp -o fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.o
In file included from fusion_sdk/calvin_files/fusion/src/FusionTagValuePairType.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:24,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp -o fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.o
In file included from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:31,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp:21:
fusion_sdk/file/CHPFileData.h:30: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/CHPBackgroundZone.h:30: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/CHPUniversalEntry.h:28: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:33,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/CHPGenotypeEntry.h:28: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:35,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/fusion/src/FusionProbeSetResults.h:28: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.cpp:396:2: warning: no newline at end of file
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.cpp -o fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.o
In file included from fusion_sdk/calvin_files/fusion/src/FusionTagValuePairType.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:24,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.cpp:22:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.cpp:22:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.cpp:22:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.cpp:22:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.cpp:22:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.cpp:22:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.cpp:22:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.h:27,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.cpp:22:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.h:28,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.cpp:22:
fusion_sdk/calvin_files/data/src/CELData.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.cpp:23:
fusion_sdk/calvin_files/parsers/src/CelFileReader.h:35: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp -o fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.o
In file included from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:31,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:26,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/file/CHPFileData.h:30: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:26,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:26,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:26,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:26,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:26,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:26,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:26,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:26,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:26,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/CHPBackgroundZone.h:30: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:26,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/CHPUniversalEntry.h:28: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:33,
                 from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:32,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:26,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/CHPGenotypeEntry.h:28: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/fusion/src/FusionCHPDataAdapterInterface.h:35,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:26,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/fusion/src/FusionProbeSetResults.h:28: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:29,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:30,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:29,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:30,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/parsers/src/DataSetReader.h:31: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:29,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:30,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.h:30,
                 from fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.cpp:21:
fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:34: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.cpp -o fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.o
In file included from fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.cpp:25: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h: In constructor `affymetrix_calvin_parameter::ParameterNameValueType::ParameterNameValueType(const std::wstring&, const void*, int32_t, const std::wstring&)':
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:345: warning: `affymetrix_calvin_parameter::ParameterNameValueType::Value' will be initialized after
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:342: warning:   `std::wstring affymetrix_calvin_parameter::ParameterNameValueType::Type'
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.cpp:130: warning:   when initialized here
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h: In constructor `affymetrix_calvin_parameter::ParameterNameValueType::ParameterNameValueType(const std::wstring&, const affymetrix_calvin_parameter::MIMEValue&, const std::wstring&)':
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:345: warning: `affymetrix_calvin_parameter::ParameterNameValueType::Value' will be initialized after
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:342: warning:   `std::wstring affymetrix_calvin_parameter::ParameterNameValueType::Type'
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.cpp:138: warning:   when initialized here
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.cpp: In member function `std::wstring affymetrix_calvin_parameter::ParameterNameValueDefaultRequiredType::DefaultToString()':
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.cpp:444: warning: enumeration value `UnknownType' not handled in switch
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.cpp: In member function `std::wstring affymetrix_calvin_parameter::ParameterNameValueType::ToString() const':
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.cpp:399: warning: enumeration value `UnknownType' not handled in switch
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/AuditFileReader.cpp -o fusion_sdk/calvin_files/parsers/src/AuditFileReader.o
In file included from fusion_sdk/calvin_files/array/src/ArrayAudit.h:29,
                 from fusion_sdk/calvin_files/parsers/src/AuditFileReader.h:27,
                 from fusion_sdk/calvin_files/parsers/src/AuditFileReader.cpp:22:
fusion_sdk/calvin_files/parameter/src/Parameter.h:34: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp -o fusion_sdk/calvin_files/parsers/src/CDFFileReader.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/CDFFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/CDFData.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/CDFFileReader.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp:22:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp:22:
fusion_sdk/calvin_files/parsers/src/DataSetReader.h:31: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp:22:
fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/CDFFileReader.cpp:22:
fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:36: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp -o fusion_sdk/calvin_files/parsers/src/CHPFileReader.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:26,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/CHPBackgroundZone.h:30: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:31,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/CHPUniversalEntry.h:28: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CHPData.h:33,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/CHPGenotypeEntry.h:28: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:29,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:29,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/DataSetReader.h:31: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:29,
                 from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/CHPFileReader.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/CHPFileReader.cpp:22:
fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:36: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp -o fusion_sdk/calvin_files/parsers/src/CelFileReader.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/data/src/CELData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/CelFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/CELData.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/CelFileReader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp:22:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp:22:
fusion_sdk/calvin_files/parsers/src/DataSetReader.h:31: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp:22:
fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/CelFileReader.cpp:22:
fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:36: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp -o fusion_sdk/calvin_files/parsers/src/DATFileReader.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DATData.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DATFileReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DATData.h:33: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.h:29,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.h:29,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/DataSetReader.h:31: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DATFileReader.h:29,
                 from fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/DATFileReader.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DATFileReader.cpp:22:
fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:36: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp -o fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp:22:
fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.h:35: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp: In member function `void affymetrix_calvin_io::DataGroupHeaderReader::ReadNextDataGroupFilePos(std::ifstream&, affymetrix_calvin_io::DataGroupHeader&)':
fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp:122: warning: unused variable 'z'
fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp: In member function `void affymetrix_calvin_io::DataGroupHeaderReader::ReadFirstDataSetFilePos(std::ifstream&, affymetrix_calvin_io::DataGroupHeader&)':
fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp:133: warning: unused variable 'z'
fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp: In member function `u_int32_t affymetrix_calvin_io::DataGroupHeaderReader::ReadDataSetCnt(std::ifstream&, affymetrix_calvin_io::DataGroupHeader&)':
fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp:144: warning: unused variable 'z'
fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp: In member function `void affymetrix_calvin_io::DataGroupHeaderReader::ReadDataGroupName(std::ifstream&, affymetrix_calvin_io::DataGroupHeader&)':
fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.cpp:155: warning: unused variable 'z'
fusion_sdk/calvin_files/data/src/BitFlag.h: At global scope:
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/DataGroupReader.cpp -o fusion_sdk/calvin_files/parsers/src/DataGroupReader.o
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:29,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:30,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:27,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/DataSetReader.h:31: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataGroupReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:32: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.cpp -o fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.h:35: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.cpp: In member function `void affymetrix_calvin_io::DataSetHeaderReader::ReadParameters(std::ifstream&, affymetrix_calvin_io::DataSetHeader&)':
fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.cpp:160: warning: deleting `const void*' is undefined
fusion_sdk/calvin_files/data/src/BitFlag.h: At global scope:
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/DataSetReader.cpp -o fusion_sdk/calvin_files/parsers/src/DataSetReader.o
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:29,
                 from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataSetReader.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataSetReader.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataSetReader.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataSetReader.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataSetReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataSetReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/parsers/src/DataSetReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/DataSetReader.h:31: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/FileHeaderReader.cpp -o fusion_sdk/calvin_files/parsers/src/FileHeaderReader.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/FileHeaderReader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/FileHeaderReader.cpp:22:
fusion_sdk/calvin_files/parsers/src/GenericDataHeaderReader.h:31: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/FileInput.cpp -o fusion_sdk/calvin_files/parsers/src/FileInput.o
fusion_sdk/calvin_files/parsers/src/FileInput.cpp:27: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/GenericDataHeaderReader.cpp -o fusion_sdk/calvin_files/parsers/src/GenericDataHeaderReader.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/parsers/src/GenericDataHeaderReader.h:27,
                 from fusion_sdk/calvin_files/parsers/src/GenericDataHeaderReader.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/GenericDataHeaderReader.h:27,
                 from fusion_sdk/calvin_files/parsers/src/GenericDataHeaderReader.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/GenericDataHeaderReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/GenericDataHeaderReader.h:31: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/parsers/src/GenericDataHeaderReader.cpp: In member function `void affymetrix_calvin_io::GenericDataHeaderReader::Read(affymetrix_calvin_io::GenericDataHeader&)':
fusion_sdk/calvin_files/parsers/src/GenericDataHeaderReader.cpp:63: warning: deleting `const void*' is undefined
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp -o fusion_sdk/calvin_files/parsers/src/GenericFileReader.o
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp:21:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp:21:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/DataSetReader.h:31: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp:22:
fusion_sdk/calvin_files/parsers/src/FileHeaderReader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/GenericFileReader.cpp:23:
fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.h:35: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp -o fusion_sdk/calvin_files/parsers/src/GridControlFileReader.o
In file included from fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/GridControlFileReader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp:23:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp:23:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp:23:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp:23:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp:23:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp:23:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp:23:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:30,
                 from fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp:23:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/DataSetReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp:23:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:28,
                 from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp:23:
fusion_sdk/calvin_files/parsers/src/DataSetReader.h:31: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:31,
                 from fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp:23:
fusion_sdk/calvin_files/parsers/src/DataGroupReader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp:23:
fusion_sdk/calvin_files/parsers/src/GenericFileReader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/parsers/src/GridControlFileReader.cpp:24:
fusion_sdk/calvin_files/parameter/src/Parameter.h:34: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/parsers/src/TextFileReader.cpp -o fusion_sdk/calvin_files/parsers/src/TextFileReader.o
In file included from fusion_sdk/calvin_files/parsers/src/TextFileReader.cpp:21:
fusion_sdk/calvin_files/parsers/src/TextFileReader.h:33: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/utils/src/AffymetrixGuid.cpp -o fusion_sdk/calvin_files/utils/src/AffymetrixGuid.o
fusion_sdk/calvin_files/utils/src/AffymetrixGuid.cpp:29: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/utils/src/AffymetrixGuid.cpp: In function `void InitializeRandomNumberGenerator()':
fusion_sdk/calvin_files/utils/src/AffymetrixGuid.cpp:50: warning: cast from pointer to integer of different size
fusion_sdk/calvin_files/utils/src/AffymetrixGuid.cpp: In constructor `affymetrix_calvin_utilities::AffymetrixGuid::AffymetrixGuid()':
fusion_sdk/calvin_files/utils/src/AffymetrixGuid.cpp:66: warning: unused variable 'nResult'
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/utils/src/DateTime.cpp -o fusion_sdk/calvin_files/utils/src/DateTime.o
fusion_sdk/calvin_files/utils/src/DateTime.cpp:33: warning: ignoring #pragma warning 
fusion_sdk/calvin_files/utils/src/DateTime.cpp: In static member function `static affymetrix_calvin_utilities::DateTime affymetrix_calvin_utilities::DateTime::Parse(std::wstring)':
fusion_sdk/calvin_files/utils/src/DateTime.cpp:160: warning: comparison between signed and unsigned integer expressions
fusion_sdk/calvin_files/utils/src/DateTime.cpp:172: warning: comparison between signed and unsigned integer expressions
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/utils/src/FileUtils.cpp -o fusion_sdk/calvin_files/utils/src/FileUtils.o
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/utils/src/StringUtils.cpp -o fusion_sdk/calvin_files/utils/src/StringUtils.o
fusion_sdk/calvin_files/utils/src/StringUtils.cpp:27: warning: ignoring #pragma warning 
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c fusion_sdk/calvin_files/utils/src/checksum.cpp -o fusion_sdk/calvin_files/utils/src/checksum.o
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c R_affx_cel_parser.cpp -o R_affx_cel_parser.o
In file included from fusion_sdk/calvin_files/fusion/src/FusionTagValuePairType.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:24,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from R_affx_cel_parser.cpp:1:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from R_affx_cel_parser.cpp:1:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from R_affx_cel_parser.cpp:1:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from R_affx_cel_parser.cpp:1:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from R_affx_cel_parser.cpp:1:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from R_affx_cel_parser.cpp:1:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from R_affx_cel_parser.cpp:1:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericData.h:30,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from R_affx_cel_parser.cpp:1:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from R_affx_cel_parser.cpp:1:
fusion_sdk/calvin_files/fusion/src/FusionCELData.h:36: warning: `class affymetrix_fusion_io::FusionCELData' has virtual functions but non-virtual destructor
In file included from D:/biocbld/R-2.3.0/include/R.h:49,
                 from R_affx_cel_parser.cpp:10:
D:/biocbld/R-2.3.0/include/R_ext/RS.h:40:1: warning: "ERROR" redefined
In file included from d:/usr/MinGW/bin/../lib/gcc/mingw32/3.4.2/../../../../include/windows.h:52,
                 from fusion_sdk/calvin_files/data/src/DataSet.h:35,
                 from fusion_sdk/calvin_files/data/src/GenericData.h:31,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELDataAdapterInterface.h:28,
                 from fusion_sdk/calvin_files/fusion/src/FusionCELData.h:27,
                 from R_affx_cel_parser.cpp:1:
d:/usr/MinGW/bin/../lib/gcc/mingw32/3.4.2/../../../../include/wingdi.h:311:1: warning: this is the location of the previous definition
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c R_affx_cdf_parser.cpp -o R_affx_cdf_parser.o
In file included from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:27,
                 from R_affx_cdf_parser.cpp:1:
fusion_sdk/file/CDFFileData.h:31: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_parser.cpp:1:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_parser.cpp:1:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_parser.cpp:1:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_parser.cpp:1:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_parser.cpp:1:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_parser.cpp:1:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_parser.cpp:1:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_parser.cpp:1:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_parser.cpp:1:
fusion_sdk/calvin_files/data/src/CDFData.h:36: warning: ignoring #pragma warning 
In file included from D:/biocbld/R-2.3.0/include/R.h:49,
                 from R_affx_cdf_parser.cpp:9:
D:/biocbld/R-2.3.0/include/R_ext/RS.h:40:1: warning: "ERROR" redefined
In file included from d:/usr/MinGW/bin/../lib/gcc/mingw32/3.4.2/../../../../include/windows.h:52,
                 from fusion_sdk/file/CDFFileData.h:32,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:27,
                 from R_affx_cdf_parser.cpp:1:
d:/usr/MinGW/bin/../lib/gcc/mingw32/3.4.2/../../../../include/wingdi.h:311:1: warning: this is the location of the previous definition
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
g++  -imacros R_affx_constants.h -Ifusion_sdk/calvin_files/data/src -Ifusion_sdk/calvin_files/array/src -Ifusion_sdk/calvin_files/portability/src -Ifusion_sdk/calvin_files/utils/src -Ifusion_sdk/calvin_files/exception/src -Ifusion_sdk/calvin_files/parameter/src -Ifusion_sdk/calvin_files/parsers/src -Ifusion_sdk/calvin_files/template/src -Ifusion_sdk/file -Ifusion_sdk/portability -Ifusion_sdk/gcast/src -Ifusion_sdk/calvin_files/fusion/src -Ifusion_sdk/calvin_files/fusion/src/GCOSAdapter -Ifusion_sdk/calvin_files/fusion/src/CalvinAdapter -D_USE_MEM_MAPPING_ -ID:/biocbld/R-2.3.0/include -Wall -O2   -c R_affx_cdf_extras.cpp -o R_affx_cdf_extras.o
In file included from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:27,
                 from R_affx_cdf_extras.cpp:1:
fusion_sdk/file/CDFFileData.h:31: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/GenericDataHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_extras.cpp:1:
fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.h:34: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:31,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_extras.cpp:1:
fusion_sdk/calvin_files/data/src/GenericDataHeader.h:32: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_extras.cpp:1:
fusion_sdk/calvin_files/data/src/ColumnInfo.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataSetHeader.h:33,
                 from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_extras.cpp:1:
fusion_sdk/calvin_files/data/src/BitFlag.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_extras.cpp:1:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:36: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/DataGroupHeader.h:26,
                 from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_extras.cpp:1:
fusion_sdk/calvin_files/data/src/DataSetHeader.h:135:2: warning: "/*" within comment
In file included from fusion_sdk/calvin_files/data/src/FileHeader.h:32,
                 from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_extras.cpp:1:
fusion_sdk/calvin_files/data/src/DataGroupHeader.h:29: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/data/src/CDFData.h:27,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_extras.cpp:1:
fusion_sdk/calvin_files/data/src/FileHeader.h:35: warning: ignoring #pragma warning 
In file included from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:28,
                 from R_affx_cdf_extras.cpp:1:
fusion_sdk/calvin_files/data/src/CDFData.h:36: warning: ignoring #pragma warning 
In file included from D:/biocbld/R-2.3.0/include/R.h:49,
                 from R_affx_cdf_extras.cpp:9:
D:/biocbld/R-2.3.0/include/R_ext/RS.h:40:1: warning: "ERROR" redefined
In file included from d:/usr/MinGW/bin/../lib/gcc/mingw32/3.4.2/../../../../include/windows.h:52,
                 from fusion_sdk/file/CDFFileData.h:32,
                 from fusion_sdk/calvin_files/fusion/src/FusionCDFData.h:27,
                 from R_affx_cdf_extras.cpp:1:
d:/usr/MinGW/bin/../lib/gcc/mingw32/3.4.2/../../../../include/wingdi.h:311:1: warning: this is the location of the previous definition
fusion_sdk/calvin_files/data/src/BitFlag.h:35: warning: 'affymetrix_calvin_io::DEFAULT_DATA_SET_HDR_FLAG' defined but not used
windres --include-dir D:/biocbld/R-2.3.0/include  -i affxparser_res.rc -o affxparser_res.o
g++  -shared -s  -o affxparser.dll affxparser.def fusion_sdk/file/BARFileData.o fusion_sdk/file/BPMAPFileData.o fusion_sdk/file/CDFFileData.o fusion_sdk/file/CELFileData.o fusion_sdk/file/CHPFileData.o fusion_sdk/file/EXPFileData.o fusion_sdk/file/FileIO.o fusion_sdk/file/GRCFileData.o fusion_sdk/file/MSKFileData.o fusion_sdk/file/PSIFileData.o fusion_sdk/gcast/src/GridControlData.o fusion_sdk/calvin_files/array/src/ArrayAttributes.o fusion_sdk/calvin_files/array/src/ArrayAudit.o fusion_sdk/calvin_files/array/src/ArrayData.o fusion_sdk/calvin_files/data/src/CDFData.o fusion_sdk/calvin_files/data/src/CDFProbeGroupInformation.o fusion_sdk/calvin_files/data/src/CDFProbeInformation.o fusion_sdk/calvin_files/data/src/CDFProbeSetInformation.o fusion_sdk/calvin_files/data/src/CDFQCProbeInformation.o fusion_sdk/calvin_files/data/src/CDFQCProbeSetInformation.o fusion_sdk/calvin_files/data/src/CELData.o fusion_sdk/calvin_files/data/src/CHPBackgroundZone.o fusion_sdk/calvin_files/data/src/CHPData.o fusion_sdk/calvin_files/data/src/CHPExpressionEntry.o fusion_sdk/calvin_files/data/src/CHPGenotypeEntry.o fusion_sdk/calvin_files/data/src/CHPUniversalEntry.o fusion_sdk/calvin_files/data/src/DATData.o fusion_sdk/calvin_files/data/src/DataGroup.o fusion_sdk/calvin_files/data/src/DataGroupHeader.o fusion_sdk/calvin_files/data/src/DataSet.o fusion_sdk/calvin_files/data/src/DataSetHeader.o fusion_sdk/calvin_files/data/src/FileHeader.o fusion_sdk/calvin_files/data/src/GenericData.o fusion_sdk/calvin_files/data/src/GenericDataHeader.o fusion_sdk/calvin_files/exception/src/ExceptionBase.o fusion_sdk/calvin_files/fusion/src/FusionCDFData.o fusion_sdk/calvin_files/fusion/src/FusionCDFQCProbeSetNames.o fusion_sdk/calvin_files/fusion/src/FusionCELData.o fusion_sdk/calvin_files/fusion/src/FusionCHPData.o fusion_sdk/calvin_files/fusion/src/FusionGrcFileReader.o fusion_sdk/calvin_files/fusion/src/FusionProbeSetResults.o fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCELDataAdapter.o fusion_sdk/calvin_files/fusion/src/GCOSAdapter/GCOSCHPDataAdapter.o fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCELDataAdapter.o fusion_sdk/calvin_files/fusion/src/CalvinAdapter/CalvinCHPDataAdapter.o fusion_sdk/calvin_files/parameter/src/ParameterNameValueType.o fusion_sdk/calvin_files/parsers/src/AuditFileReader.o fusion_sdk/calvin_files/parsers/src/CDFFileReader.o fusion_sdk/calvin_files/parsers/src/CHPFileReader.o fusion_sdk/calvin_files/parsers/src/CelFileReader.o fusion_sdk/calvin_files/parsers/src/DATFileReader.o fusion_sdk/calvin_files/parsers/src/DataGroupHeaderReader.o fusion_sdk/calvin_files/parsers/src/DataGroupReader.o fusion_sdk/calvin_files/parsers/src/DataSetHeaderReader.o fusion_sdk/calvin_files/parsers/src/DataSetReader.o fusion_sdk/calvin_files/parsers/src/FileHeaderReader.o fusion_sdk/calvin_files/parsers/src/FileInput.o fusion_sdk/calvin_files/parsers/src/GenericDataHeaderReader.o fusion_sdk/calvin_files/parsers/src/GenericFileReader.o fusion_sdk/calvin_files/parsers/src/GridControlFileReader.o fusion_sdk/calvin_files/parsers/src/TextFileReader.o fusion_sdk/calvin_files/utils/src/AffymetrixGuid.o fusion_sdk/calvin_files/utils/src/DateTime.o fusion_sdk/calvin_files/utils/src/FileUtils.o fusion_sdk/calvin_files/utils/src/StringUtils.o fusion_sdk/calvin_files/utils/src/checksum.o R_affx_cel_parser.o R_affx_cdf_parser.o R_affx_cdf_extras.o affxparser_res.o  -LD:/biocbld/R-2.3.0/bin -lws2_32  -lR
  ... DLL made
  installing DLL
  installing R files
  save image
  installing inst files
  installing man source files
  installing indices
  installing help
 >>> Building/Updating help pages for package 'affxparser'
     Formats: text html latex example chm 
  affxparser-package                text    html    latex           chm
  affxparserInfo                    text    html    latex   example chm
  applyCdfGroups                    text    html    latex   example chm
  cdfAddBaseMmCounts                text    html    latex           chm
  cdfAddProbeOffsets                text    html    latex           chm
  cdfGetFields                      text    html    latex           chm
  cdfGtypeCelToPQ                   text    html    latex           chm
  cdfMergeStrands                   text    html    latex           chm
  cdfMergeToQuartets                text    html    latex           chm
  cellindexmaps                     text    html    latex           chm
  cellxy                            text    html    latex           chm
  findCdf                           text    html    latex   example chm
  findFiles                         text    html    latex           chm
  invertMap                         text    html    latex   example chm
  read.affybatch2                   text    html    latex   example chm
  readCdf                           text    html    latex           chm
  readCdfCellIndices                text    html    latex           chm
  readCdfGroupNames                 text    html    latex           chm
  readCdfHeader                     text    html    latex   example chm
  readCdfIsPm                       text    html    latex           chm
  readCdfNbrOfCellsPerUnitGroup     text    html    latex   example chm
  readCdfUnitNames                  text    html    latex   example chm
  readCdfUnits                      text    html    latex   example chm
  readCdfUnitsWriteMap              text    html    latex   example chm
  readCel                           text    html    latex   example chm
  readCelHeader                     text    html    latex   example chm
  readCelIntensities                text    html    latex   example chm
  readCelRectangle                  text    html    latex   example chm
  readCelUnits                      text    html    latex   example chm
  zipping help files
Microsoft HTML Help Compiler 4.74.8702



Compiling d:\biocbld\work-area\1.8d\madman\Rpacks\R.INSTALL\affxparser\chm\affxparser.chm





Compile time: 0 minutes, 0 seconds

30	Topics

121	Local links

32	Internet links

1	Graphic





Created d:\biocbld\work-area\1.8d\madman\Rpacks\R.INSTALL\affxparser\chm\affxparser.chm, 68,435 bytes

Compression decreased file by 81,782 bytes.

  preparing package affxparser for lazy loading
  adding MD5 sums

packaged installation of package 'affxparser' as affxparser_1.4.0.zip
* DONE (affxparser)