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Package 26/172 | OS | Arch | BUILD | CHECK | BUILD BIN |
biomaRt1.6.3Steffen Durinck | Linux (SUSE 9.2) | x86_64 | OK | OK | |
Linux (SUSE 9.2) | i686 | OK | OK | ||
Solaris 2.9 | sparc | OK | WARNINGS | ||
Linux (SUSE 10.0) | x86_64 | OK | OK | ||
Windows Server 2003 | x86_64 | OK | [ OK ] | OK |
Package: biomaRt |
Version: 1.6.3 |
Command: D:\biocbld\1.8d\R\bin\R.exe CMD check biomaRt_1.6.3.tar.gz |
RetCode: 0 |
Time: 218.8 seconds |
Status: OK |
CheckDir: biomaRt.Rcheck |
Warnings: 0 |
* checking for working latex ... OK * using log directory 'D:/biocbld/1.8d/Rpacks/biomaRt.Rcheck' * using Version 2.3.1 (2006-06-01) * checking for file 'biomaRt/DESCRIPTION' ... OK * this is package 'biomaRt' version '1.6.3' * checking package dependencies ... OK * checking if this is a source package ... OK * checking whether package 'biomaRt' can be installed ... OK * checking package directory ... OK * checking for portable file names ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for syntax errors ... OK * checking R files for library.dynam ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking Rd files ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * creating biomaRt-Ex.R ... OK * checking examples ... OK * checking package vignettes in 'inst/doc' ... OK * creating biomaRt-manual.tex ... OK * checking biomaRt-manual.tex ... OK
biomaRt.Rcheck/00install.out:
installing R.css in D:/biocbld/1.8d/Rpacks/biomaRt.Rcheck ---------- Making package biomaRt ------------ adding build stamp to DESCRIPTION installing NAMESPACE file and metadata installing R files save image Loading required package: XML Loading required package: RCurl installing inst files installing man source files installing indices installing help >>> Building/Updating help pages for package 'biomaRt' Formats: text html latex example chm Mart-class text html latex chm exportFASTA text html latex example chm getAffyArrays text html latex example chm getBM text html latex example chm getFeature text html latex example chm getGO text html latex example chm getGene text html latex example chm getHomolog text html latex example chm getINTERPRO text html latex example chm getOMIM text html latex example chm getPossibleXrefs text html latex example chm getSNP text html latex example chm getSequence text html latex example chm getXref text html latex example chm listAttributes text html latex example chm listDatasets text html latex example chm listFilters text html latex example chm listMarts text html latex example chm martConnect text html latex example chm martDisconnect text html latex example chm martTable-class text html latex chm parseAttributes text html latex chm parseFilters text html latex chm useDataset text html latex example chm useMart text html latex example chm Microsoft HTML Help Compiler 4.74.8702 Compiling d:\biocbld\1.8d\Rpacks\biomaRt.Rcheck\00_pkg_src\biomaRt\chm\biomaRt.chm Compile time: 0 minutes, 0 seconds 26 Topics 50 Local links 25 Internet links 1 Graphic Created d:\biocbld\1.8d\Rpacks\biomaRt.Rcheck\00_pkg_src\biomaRt\chm\biomaRt.chm, 31,505 bytes Compression decreased file by 30,293 bytes. adding MD5 sums * DONE (biomaRt)